With some screenshots, it seems as if it’s now approved 
Happy to update screenshots, etc. and I’ll grab a signed MSIX installer in a bit.
For the protein example, I’ve been using 6vxx (i.e. COVID spike protein) with ball-and-stick turned off, but wireframe and cartoons turned on.
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It turns out there are indeed 2 versions of Avogadro on my system, one is Qt5 and one is Qt6. Opening this output file works fine in the Qt5 version, but will crash the Qt6 version.
000.out.tar.gz (2.9 MB)
I can’t really get more specific about the Qt6 version since this is all the “About” screen shows:
As a side note, perhaps it would be good to double check the colors for dark mode 
Edit:
And also the spacing for the text in the files, as well as the missing X next to the file name.
That’s the reason I just redid the about screen.
Yes, there’s definitely a bug there.