I’ve been playing around with Avogadro and I wanted to export structure with a transparent background. But from my understanding, the only way to do it is with Povray. But exporting with PovRay gives me two problems.
1st - Shows some shadow of the structure in some atoms. Is there a way to remove this?
2nd - It cuts part of the structure for some case I do not get it. Is there a way to render the full structure?