A recent publication in J. Cheminf. looks like it would be useful to many Avogadro users:
Kleinschmidt, N., Lemmin, T. “BuildAMol: a versatile Python toolkit for fragment-based molecular design.” J Cheminform 16, 104 (2024). BuildAMol: a versatile Python toolkit for fragment-based molecular design | Journal of Cheminformatics | Full Text
The package has really nice documentation for a range of “build a molecule” tasks:
- building up biomolecules (proteins, glycans)
- glycosylating a protein
- adding a solvation box
- polymers
- dendrimers
- nanotubes
- metal-organic frameworks
- etc.