Starting program: /home/abc/avo/qt5/prefix/bin/avogadro2 [Thread debugging using libthread_db enabled] Using host libthread_db library "/lib64/libthread_db.so.1". [New Thread 0x7ffff0ca36c0 (LWP 20788)] [New Thread 0x7fffea9326c0 (LWP 20789)] [New Thread 0x7fffea1316c0 (LWP 20790)] [New Thread 0x7fffe96fe6c0 (LWP 20791)] [New Thread 0x7fffe8d876c0 (LWP 20792)] [New Thread 0x7fffe1dff6c0 (LWP 20793)] [New Thread 0x7fffe15fe6c0 (LWP 20794)] [New Thread 0x7fffe0dfd6c0 (LWP 20795)] [New Thread 0x7fffd49ff6c0 (LWP 20796)] [New Thread 0x7fffbffff6c0 (LWP 20797)] [New Thread 0x7fffbf7fe6c0 (LWP 20798)] [Thread 0x7fffbf7fe6c0 (LWP 20798) exited] [Thread 0x7fffbffff6c0 (LWP 20797) exited] [Thread 0x7fffd49ff6c0 (LWP 20796) exited] [Thread 0x7fffe0dfd6c0 (LWP 20795) exited] Using locale: "en_GB" AvogadroApp Translation "en_GB" loaded "/home/abc/avo/qt5/prefix/bin/../share/avogadro2/i18n/" AvogadroLibs Translation "en_GB" loaded "/home/abc/avo/qt5/prefix/bin/../share/avogadro2/i18n/" [New Thread 0x7fffe0dfd6c0 (LWP 20799)] [New Thread 0x7fffd49ff6c0 (LWP 20800)] [New Thread 0x7fffbffff6c0 (LWP 20801)] [New Thread 0x7fffbf7fe6c0 (LWP 20802)] [Thread 0x7fffbf7fe6c0 (LWP 20802) exited] [Thread 0x7fffbffff6c0 (LWP 20801) exited] [Thread 0x7fffd49ff6c0 (LWP 20800) exited] [Thread 0x7fffe0dfd6c0 (LWP 20799) exited] [New Thread 0x7fffe0dfd6c0 (LWP 20803)] [New Thread 0x7fffd49ff6c0 (LWP 20804)] [New Thread 0x7fffbffff6c0 (LWP 20805)] [New Thread 0x7fffbf7fe6c0 (LWP 20806)] [New Thread 0x7fffbe3ff6c0 (LWP 20807)] Extension plugins dynamically found… 42 OBProcess::executeObabel: Running "/home/abc/avo/qt5/prefix/bin/obabel" "-L formats read" [Detaching after fork from child process 20808] [New Thread 0x7fffbdbfe6c0 (LWP 20809)] OBProcess::executeObabel: Running "/home/abc/avo/qt5/prefix/bin/obabel" "-L formats write" [Detaching after fork from child process 20810] OBProcess::executeObabel: Running "/home/abc/avo/qt5/prefix/bin/obabel" "-L forcefields" [Detaching after fork from child process 20812] OBProcess::executeObabel: Running "/home/abc/avo/qt5/prefix/bin/obabel" "-L charges" [Detaching after fork from child process 20814] OBProcess::executeObabel: Running "/home/abc/avo/qt5/prefix/bin/obabel" "-V" [Detaching after fork from child process 20815] "/home/abc/avo/qt5/prefix/bin/obabel" found: "/home/abc/avo/qt5/prefix/bin/obabel: Open Babel 3.1.1 -- Dec 1 2023 -- 12:14:22" "Checking for energy scripts in path /home/abc/.local/share/OpenChemistry/Avogadro/energy" "Checking for energy scripts in path /home/abc/.local/share/flatpak/exports/share/OpenChemistry/Avogadro/energy" "Checking for energy scripts in path /var/lib/flatpak/exports/share/OpenChemistry/Avogadro/energy" "Checking for energy scripts in path /usr/local/share/OpenChemistry/Avogadro/energy" "Checking for energy scripts in path /usr/share/OpenChemistry/Avogadro/energy" "Checking for energy scripts in path /home/abc/avo/qt5/prefix/bin/../lib64/avogadro2/scripts/energy" [Detaching after fork from child process 20819] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/ani2x.py" [Detaching after fork from child process 20824] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/gaff.py" [Detaching after fork from child process 20825] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/gfn1.py" [Detaching after fork from child process 20847] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/gfn2.py" [Detaching after fork from child process 20852] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/gfnff.py" [Detaching after fork from child process 20853] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/mmff94.py" [Detaching after fork from child process 20854] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/energy/uff.py" "Checking for commands scripts in path /home/abc/.local/share/OpenChemistry/Avogadro/commands" "Checking for commands scripts in path /home/abc/.local/share/flatpak/exports/share/OpenChemistry/Avogadro/commands" "Checking for commands scripts in path /var/lib/flatpak/exports/share/OpenChemistry/Avogadro/commands" "Checking for commands scripts in path /usr/local/share/OpenChemistry/Avogadro/commands" "Checking for commands scripts in path /usr/share/OpenChemistry/Avogadro/commands" "Checking for commands scripts in path /home/abc/avo/qt5/prefix/bin/../lib64/avogadro2/scripts/commands" "Checking for inputGenerators scripts in path /home/abc/.local/share/OpenChemistry/Avogadro/inputGenerators" "Checking for inputGenerators scripts in path /home/abc/.local/share/flatpak/exports/share/OpenChemistry/Avogadro/inputGenerators" "Checking for inputGenerators scripts in path /var/lib/flatpak/exports/share/OpenChemistry/Avogadro/inputGenerators" "Checking for inputGenerators scripts in path /usr/local/share/OpenChemistry/Avogadro/inputGenerators" "Checking for inputGenerators scripts in path /usr/share/OpenChemistry/Avogadro/inputGenerators" "Checking for inputGenerators scripts in path /home/abc/avo/qt5/prefix/bin/../lib64/avogadro2/scripts/inputGenerators" "Checking for charges scripts in path /home/abc/.local/share/OpenChemistry/Avogadro/charges" "Checking for charges scripts in path /home/abc/.local/share/flatpak/exports/share/OpenChemistry/Avogadro/charges" "Checking for charges scripts in path /var/lib/flatpak/exports/share/OpenChemistry/Avogadro/charges" "Checking for charges scripts in path /usr/local/share/OpenChemistry/Avogadro/charges" "Checking for charges scripts in path /usr/share/OpenChemistry/Avogadro/charges" "Checking for charges scripts in path /home/abc/avo/qt5/prefix/bin/../lib64/avogadro2/scripts/charges" [Detaching after fork from child process 20855] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/charges/antechamber.py" [Detaching after fork from child process 20856] "Cannot load script /home/abc/avo/qt5/prefix/lib64/avogadro2/scripts/charges/xtb.py" "Checking for formatScripts scripts in path /home/abc/.local/share/OpenChemistry/Avogadro/formatScripts" "Checking for formatScripts scripts in path /home/abc/.local/share/flatpak/exports/share/OpenChemistry/Avogadro/formatScripts" "Checking for formatScripts scripts in path /var/lib/flatpak/exports/share/OpenChemistry/Avogadro/formatScripts" "Checking for formatScripts scripts in path /usr/local/share/OpenChemistry/Avogadro/formatScripts" "Checking for formatScripts scripts in path /usr/share/OpenChemistry/Avogadro/formatScripts" "Checking for formatScripts scripts in path /home/abc/avo/qt5/prefix/bin/../lib64/avogadro2/scripts/formatScripts" [Detaching after fork from child process 20857] [Detaching after fork from child process 20858] [Detaching after fork from child process 20859] Thread 1 "avogadro2" received signal SIGSEGV, Segmentation fault. 0x00007ffff7027aff in ?? () from /lib64/libQt5Widgets.so.5