Hey Everyone,
Trying to setup Avo on my home box but i’ve been having problems compiling
the latest source version of OpenBabel. Below is a loooong print out of the
error if thats of any help to anyone?
./…/include/openbabel/forcefield.h:63: error: invalid function declaration
…/…/include/openbabel/forcefield.h:125: error: invalid function
declaration
…/…/include/openbabel/forcefield.h:183: error: invalid function
declaration
forcefieldmm2.h:32: error: expected class-name before ‘{’ token
forcefieldmm2.h:46: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:46: error: template argument 1 is invalid
forcefieldmm2.h:46: error: template argument 2 is invalid
forcefieldmm2.h:50: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:50: error: template argument 1 is invalid
forcefieldmm2.h:50: error: template argument 2 is invalid
forcefieldmm2.h:55: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:55: error: template argument 1 is invalid
forcefieldmm2.h:55: error: template argument 2 is invalid
forcefieldmm2.h:57: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:57: error: template argument 1 is invalid
forcefieldmm2.h:57: error: template argument 2 is invalid
forcefieldmm2.h:64: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:64: error: template argument 1 is invalid
forcefieldmm2.h:64: error: template argument 2 is invalid
forcefieldmm2.h:69: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:69: error: template argument 1 is invalid
forcefieldmm2.h:69: error: template argument 2 is invalid
forcefieldmm2.h:73: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:73: error: template argument 1 is invalid
forcefieldmm2.h:73: error: template argument 2 is invalid
forcefieldmm2.h:77: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.h:77: error: template argument 1 is invalid
forcefieldmm2.h:77: error: template argument 2 is invalid
forcefieldmm2.h: In constructor
’OpenBabel::OBForceFieldMM2::OBForceFieldMM2(const char*, bool)’:
forcefieldmm2.h:90: error: class ‘OpenBabel::OBForceFieldMM2’ does not have
any field named ‘OBForceField’
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_Bond()’:
forcefieldmm2.cpp:28: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.cpp:28: error: ‘parameter’ was not declared in this scope
forcefieldmm2.cpp:36: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:39: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:48: error: ‘GetParameter’ was not declared in this scope
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_Angle()’:
forcefieldmm2.cpp:77: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.cpp:77: error: ‘parameter’ was not declared in this scope
forcefieldmm2.cpp:85: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:88: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:100: error: ‘GetParameter’ was not declared in this scope
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_StrBnd()’:
forcefieldmm2.cpp:144: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.cpp:144: error: ‘parameter’ was not declared in this scope
forcefieldmm2.cpp:153: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:163: error: ‘GetParameter’ was not declared in this scope
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_Torsion()’:
forcefieldmm2.cpp:194: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.cpp:194: error: ‘parameter’ was not declared in this scope
forcefieldmm2.cpp:203: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:218: error: ‘GetParameter’ was not declared in this scope
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_OOP()’:
forcefieldmm2.cpp:288: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:291: error: request for member ‘size’ in
’((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffoutplanebendparams’,
which is of non-class type 'int’
forcefieldmm2.cpp:292: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:306: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:307: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:316: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:318: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:327: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:329: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_VDW()’:
forcefieldmm2.cpp:349: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.cpp:349: error: ‘parameter’ was not declared in this scope
forcefieldmm2.cpp:359: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:368: error: ‘GetParameter’ was not declared in this scope
forcefieldmm2.cpp: In member function ‘double
OpenBabel::OBForceFieldMM2::E_Electrostatic()’:
forcefieldmm2.cpp:421: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:425: error: ‘GetParameterIdx’ was not declared in this
scope
forcefieldmm2.cpp:427: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp:440: error: invalid types ‘int[int]’ for array subscript
forcefieldmm2.cpp: In member function ‘OpenBabel::OBForceFieldMM2&
OpenBabel::OBForceFieldMM2::operator=(OpenBabel::OBForceFieldMM2&)’:
forcefieldmm2.cpp:497: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp:497: error: ‘class OpenBabel::OBForceFieldMM2’ has no
member named '_mol’
forcefieldmm2.cpp: In member function ‘bool
OpenBabel::OBForceFieldMM2::Setup(OpenBabel::OBMol&)’:
forcefieldmm2.cpp:503: error: ‘_mol’ was not declared in this scope
forcefieldmm2.cpp: In member function ‘bool
OpenBabel::OBForceFieldMM2::ParseParamFile()’:
forcefieldmm2.cpp:515: error: ‘OBFFParameter’ was not declared in this scope
forcefieldmm2.cpp:515: error: expected ;' before 'parameter' forcefieldmm2.cpp:581: error: 'parameter' was not declared in this scope forcefieldmm2.cpp:592: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffbondparams', which is of non-class type 'int' forcefieldmm2.cpp:605: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffangleparams', which is of non-class type 'int' forcefieldmm2.cpp:611: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffstretchbendparams', which is of non-class type 'int' forcefieldmm2.cpp:624: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_fftorsionparams', which is of non-class type 'int' forcefieldmm2.cpp:631: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffoutplanebendparams', which is of non-class type 'int' forcefieldmm2.cpp:639: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffvdwprparams', which is of non-class type 'int' forcefieldmm2.cpp:646: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffvdwparams', which is of non-class type 'int' forcefieldmm2.cpp:654: error: request for member 'push_back' in '((OpenBabel::OBForceFieldMM2*)this)->OpenBabel::OBForceFieldMM2::_ffdipoleparams', which is of non-class type 'int' forcefieldmm2.cpp: In member function 'bool OpenBabel::OBForceFieldMM2::SetMM2Types()': forcefieldmm2.cpp:672: error: '_mol' was not declared in this scope make[3]: *** [forcefieldmm2.lo] Error 1 make[3]: Leaving directory
/home/james/university/4th_year/engg492/code/openbabel/src/forcefields’
make[2]: *** [all-recursive] Error 1
make[2]: Leaving directory
/home/james/university/4th_year/engg492/code/openbabel/src' make[1]: *** [all] Error 2 make[1]: Leaving directory
/home/james/university/4th_year/engg492/code/openbabel/src’
make: *** [all-recursive] Error 1
Am i missing something? I did configure beforehand. I’m following the
instructions here: http://avogadro.sourceforge.net/wiki/Compiling
Hope someone can help!
Thanks,
James