Crashes with unit cell build (various)

SourceForge_net · June 19, 2008, 6:43pm

Bugs item #1998154, was opened at 2008-06-19 18:43
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Category: None
Group: v 0.8.0
Status: Open
Resolution: None
Priority: 5
Private: No
Submitted By: Nobody/Anonymous (nobody)
Assigned to: Nobody/Anonymous (nobody)
Summary: Crashes with unit cell build (various)

Initial Comment:
Process: avogadro [644]
Path: /Applications/avogadro.app/Contents/MacOS/avogadro
Identifier: net.sourceforge
Version: (0.8.1)
Code Type: X86 (Native)
Parent Process: launchd [59]

Date/Time: 2008-06-19 14:39:11.569 -0400
OS Version: Mac OS X 10.5.2 (9C7010)
Report Version: 6

Exception Type: EXC_BAD_ACCESS (SIGBUS)
Exception Codes: KERN_PROTECTION_FAILURE at 0x000000000000000c
Crashed Thread: 0

Thread 0 Crashed:
0 libopenbabel.2.dylib 0x002dc2d0 OpenBabel::SpaceGroup::Transform(OpenBabel::vector3 const&) const + 32
1 libunitcellextension.so 0x196a915d Avogadro::UnitCellExtension::fillUnitCell() + 495
2 libunitcellextension.so 0x196a9a54 Avogadro::UnitCellExtension::qt_metacall(QMetaObject::Call, int, void**) + 272
3 QtCore 0x0052df60 QMetaObject::activate(QObject*, int, int, void**) + 528
4 libunitcellextension.so 0x196ab313 Avogadro::UnitCellParamDialog::qt_metacall(QMetaObject::Call, int, void**) + 485
5 QtCore 0x0052df60 QMetaObject::activate(QObject*, int, int, void**) + 528
6 QtGui 0x00f8badc QAbstractButton::clicked(bool) + 76
7 QtGui 0x00d02af6 QAbstractButtonPrivate::emitClicked() + 54
8 QtGui 0x00d02beb QAbstractButtonPrivate::click() + 139
9 QtGui 0x00d02e30 QAbstractButton::mouseReleaseEvent(QMouseEvent*) + 128
10 QtGui 0x009ed738 QWidget::event(QEvent*) + 3736
11 QtGui 0x00d03583 QAbstractButton::event(QEvent*) + 83
12 QtGui 0x00da1eea QPushButton::event(QEvent*) + 58
13 QtGui 0x009a5f1f QApplicationPrivate::notify_helper(QObject*, QEvent*) + 191
14 QtGui 0x009acdfd QApplication::notify(QObject*, QEvent*) + 1309
15 QtCore 0x0051c8c1 QCoreApplication::notifyInternal(QObject*, QEvent*) + 145
16 QtGui 0x009fe2e7 QApplicationPrivate::globalEventProcessor(OpaqueEventHandlerCallRef*, OpaqueEventRef*, void*) + 5703
17 com.apple.HIToolbox 0x92c55fc3 DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*) + 1181
18 com.apple.HIToolbox 0x92c553fd SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*) + 405
19 com.apple.HIToolbox 0x92c71e0e SendEventToEventTarget + 52
20 com.apple.HIToolbox 0x92c84874 ToolboxEventDispatcherHandler(OpaqueEventHandlerCallRef*, OpaqueEventRef*, void*) + 1208
21 com.apple.HIToolbox 0x92c5637c DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*) + 2134
22 com.apple.HIToolbox 0x92c553fd SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*) + 405
23 com.apple.HIToolbox 0x92c71e0e SendEventToEventTarget + 52
24 QtGui 0x009f9111 qt_mac_send_event(QFlagsQEventLoop::ProcessEventsFlag, OpaqueEventRef*, OpaqueWindowPtr*) + 97
25 QtGui 0x00a077b2 QEventDispatcherMac::processEvents(QFlagsQEventLoop::ProcessEventsFlag) + 626
26 QtCore 0x0051be81 QEventLoop::processEvents(QFlagsQEventLoop::ProcessEventsFlag) + 65
27 QtCore 0x0051bf4d QEventLoop::exec(QFlagsQEventLoop::ProcessEventsFlag) + 157
28 QtCore 0x0051fee1 QCoreApplication::exec() + 161
29 net.sourceforge 0x0000f722 main + 2568
30 net.sourceforge 0x000066a6 _start + 216
31 net.sourceforge 0x000065cd start + 41

Thread 1:
0 libSystem.B.dylib 0x97038bce __semwait_signal + 10
1 libSystem.B.dylib 0x970638cd pthread_cond_wait$UNIX2003 + 73
2 libGLProgrammability.dylib 0x9036f332 glvmDoWork + 162
3 libSystem.B.dylib 0x97062c55 _pthread_start + 321
4 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 2:
0 libSystem.B.dylib 0x970319e6 mach_msg_trap + 10
1 libSystem.B.dylib 0x970391dc mach_msg + 72
2 com.apple.CoreFoundation 0x93fb00de CFRunLoopRunSpecific + 1806
3 com.apple.CoreFoundation 0x93fb0d74 CFRunLoopRun + 84
4 com.apple.DesktopServices 0x9011b46f TSystemNotificationTask::SystemNotificationTaskProc(void*) + 123
5 …ple.CoreServices.CarbonCore 0x91ae4beb PrivateMPEntryPoint + 56
6 libSystem.B.dylib 0x97062c55 _pthread_start + 321
7 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 3:
0 libSystem.B.dylib 0x970319e6 mach_msg_trap + 10
1 libSystem.B.dylib 0x970391dc mach_msg + 72
2 com.apple.CoreFoundation 0x93fb00de CFRunLoopRunSpecific + 1806
3 com.apple.CoreFoundation 0x93fb0d74 CFRunLoopRun + 84
4 com.apple.DesktopServices 0x9011b5e8 TFSEventsNotificationTask::FSEventsNotificationTaskProc(void*) + 216
5 …ple.CoreServices.CarbonCore 0x91ae4beb PrivateMPEntryPoint + 56
6 libSystem.B.dylib 0x97062c55 _pthread_start + 321
7 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 4:
0 libSystem.B.dylib 0x97038bce __semwait_signal + 10
1 libSystem.B.dylib 0x970638cd pthread_cond_wait$UNIX2003 + 73
2 …ple.CoreServices.CarbonCore 0x91ae69d7 TSWaitOnCondition + 126
3 …ple.CoreServices.CarbonCore 0x91ac58fe TSWaitOnConditionTimedRelative + 202
4 …ple.CoreServices.CarbonCore 0x91ae6654 MPWaitOnQueue + 208
5 com.apple.DesktopServices 0x90126a7a TNodeSyncTask::SyncTaskProc(void*) + 84
6 …ple.CoreServices.CarbonCore 0x91ae4beb PrivateMPEntryPoint + 56
7 libSystem.B.dylib 0x97062c55 _pthread_start + 321
8 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 5:
0 libSystem.B.dylib 0x970624c6 kevent + 10
1 libSystem.B.dylib 0x97062c55 _pthread_start + 321
2 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 6:
0 libSystem.B.dylib 0x97081b3a select$DARWIN_EXTSN + 10
1 libSystem.B.dylib 0x97062c55 _pthread_start + 321
2 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 7:
0 libSystem.B.dylib 0x97031a46 semaphore_timedwait_signal_trap + 10
1 libSystem.B.dylib 0x97063daf _pthread_cond_wait + 1244
2 libSystem.B.dylib 0x97065633 pthread_cond_timedwait_relative_np + 47
3 …ple.CoreServices.CarbonCore 0x91ac592a TSWaitOnConditionTimedRelative + 246
4 …ple.CoreServices.CarbonCore 0x91ae6654 MPWaitOnQueue + 208
5 com.apple.DesktopServices 0x901289c4 TFolderSizeTask::FolderSizeTaskProc(void*) + 104
6 …ple.CoreServices.CarbonCore 0x91ae4beb PrivateMPEntryPoint + 56
7 libSystem.B.dylib 0x97062c55 _pthread_start + 321
8 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 8:
0 libSystem.B.dylib 0x97031a46 semaphore_timedwait_signal_trap + 10
1 libSystem.B.dylib 0x97063daf _pthread_cond_wait + 1244
2 libSystem.B.dylib 0x97065633 pthread_cond_timedwait_relative_np + 47
3 com.apple.Foundation 0x91f664fc -[NSCondition waitUntilDate:] + 236
4 com.apple.Foundation 0x91f66310 -[NSConditionLock lockWhenCondition:beforeDate:] + 144
5 com.apple.Foundation 0x91f66275 -[NSConditionLock lockWhenCondition:] + 69
6 com.apple.AppKit 0x930bc7f0 -[NSUIHeartBeat _heartBeatThread:] + 753
7 com.apple.Foundation 0x91f205ad -[NSThread main] + 45
8 com.apple.Foundation 0x91f20154 NSThread__main + 308
9 libSystem.B.dylib 0x97062c55 _pthread_start + 321
10 libSystem.B.dylib 0x97062b12 thread_start + 34

Thread 0 crashed with X86 Thread State (32-bit):
eax: 0x00000000 ebx: 0x002dc2c4 ecx: 0x00000000 edx: 0x0000000c
edi: 0xbfffe6f4 esi: 0xbfffe6f4 ebp: 0xbfffe588 esp: 0xbfffe500
ss: 0x0000001f efl: 0x00010286 eip: 0x002dc2d0 cs: 0x00000017
ds: 0x0000001f es: 0x0000001f fs: 0x00000000 gs: 0x00000037
cr2: 0x0000000c

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0x95291000 - 0x95385ff4 libiconv.2.dylib ??? (???) <3f183527811098bb7332f67a1f902bfd> /usr/lib/libiconv.2.dylib
0x95386000 - 0x954beff7 libicucore.A.dylib ??? (???) /usr/lib/libicucore.A.dylib
0x954bf000 - 0x9567aff3 com.apple.QuartzComposer 2.1 (106.3) <2b38aafdbb5860fefe85d2ca6ccb6ae2> /System/Library/Frameworks/Quartz.framework/Versions/A/Frameworks/QuartzComposer.framework/Versions/A/QuartzComposer
0x9567b000 - 0x95a11ff7 com.apple.QuartzCore 1.5.2 (1.5.2) /System/Library/Frameworks/QuartzCore.framework/Versions/A/QuartzCore
0x95a12000 - 0x95a89fe3 com.apple.CFNetwork 221.5 (221.5) /System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/CFNetwork.framework/Versions/A/CFNetwork
0x95a8a000 - 0x95aa8ff3 com.apple.DirectoryService.Framework 3.5.1 (3.5.1) <5ee87dc53f9c1f5e4578a63ff31437a2> /System/Library/Frameworks/DirectoryService.framework/Versions/A/DirectoryService
0x95aa9000 - 0x95ac4ffb libPng.dylib ??? (???) <0c5f9010b3b70a3d4bce4f93b78fc8a7> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libPng.dylib
0x95ae2000 - 0x95b94ffb libcrypto.0.9.7.dylib ??? (???) <8f92cbdc8777bea2ec49b06ee79fabc0> /usr/lib/libcrypto.0.9.7.dylib
0x95b95000 - 0x95bb9fff libxslt.1.dylib ??? (???) <59399cc446ed903fd9479526ee9f116b> /usr/lib/libxslt.1.dylib
0x95bba000 - 0x95be2fff libcups.2.dylib ??? (???) <2f0a710a9128882efb2ed92ad139b58c> /usr/lib/libcups.2.dylib
0x95be3000 - 0x95c6fffb com.apple.QTKit 7.4.5 (67) /System/Library/Frameworks/QTKit.framework/Versions/A/QTKit
0x95c70000 - 0x95c7cff5 libGL.dylib ??? (???) /System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libGL.dylib
0x95c7d000 - 0x95cbcfef libTIFF.dylib ??? (???) <4b7d3b3b9a9c8335c2538371cb39b60b> /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib
0x95cbd000 - 0x95cd1ff3 com.apple.ImageCapture 4.0 (5.0.0) /System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/ImageCapture.framework/Versions/A/ImageCapture
0x95ce2000 - 0x95dadfff com.apple.ColorSync 4.5.0 (4.5.0) /System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
0x95dae000 - 0x95de8fff com.apple.coreui 1.1 (61) /System/Library/PrivateFrameworks/CoreUI.framework/Versions/A/CoreUI
0x97031000 - 0x97190ff3 libSystem.B.dylib ??? (???) /usr/lib/libSystem.B.dylib
0xba900000 - 0xba916fff libJapaneseConverter.dylib ??? (???) <79f7cbef6bc9f4c32a42d63c7332bf8e> /System/Library/CoreServices/Encodings/libJapaneseConverter.dylib
0xbab00000 - 0xbab21fe2 libKoreanConverter.dylib ??? (???) <4b497e7a0027447eaff2b45572bb85ea> /System/Library/CoreServices/Encodings/libKoreanConverter.dylib
0xfffe8000 - 0xfffebfff libobjc.A.dylib ??? (???) /usr/lib/libobjc.A.dylib
0xffff0000 - 0xffff1780 libSystem.B.dylib ??? (???) /usr/lib/libSystem.B.dylib

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