Aligning or docking two molecules

Feature Requests item #3241754, was opened at 2011-03-24 21:05
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Category: Interface
Group: None
Status: Open
Resolution: None
Priority: 5
Private: No
Submitted By: Nobody/Anonymous (nobody)
Assigned to: Nobody/Anonymous (nobody)
Summary: Aligning or docking two molecules

Initial Comment:
I can’t figure out how to move and align two molecules in the space. For example, put in two ethylene molecules and try to line them up so that the double bonds are “facing” each other and the carbons form a square (not a trapazoid). When I try the alignment tool, it seems to work on the whole space (both molecules) rather than each independently.

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